Familial Adenomatous Polyposis (FAP)
Content of This Page
1- Introduction
2- Causes
3- Pathophysiology
4- Stages of The Disease
5- Diagnosis
6- Treatment
Introduction
Familial Adenomatous Polyposis (FAP) is a hereditary cancer syndrome characterized by the development of hundreds to thousands of adenomatous polyps in the colon and rectum, typically beginning in adolescence or early adulthood. If left untreated, nearly all individuals with classic FAP will develop colorectal cancer, usually by the age of 40–50 years. FAP is caused by a germline mutation in the APC gene (adenomatous polyposis coli), a tumor suppressor gene located on chromosome 5q21. It follows an autosomal dominant inheritance pattern, meaning a child of an affected parent has a 50% chance of inheriting the condition.
There are also attenuated forms of FAP (AFAP), where fewer polyps develop (usually <100), and cancer onset is later.

Pathophysiology
Germline mutation in the APC gene (Adenomatous Polyposis Coli gene)
Located on chromosome 5q21–q22
Inherited in an autosomal dominant pattern
Mutation leads to uncontrolled cell growth and formation of multiple adenomatous polyps
De novo mutations
Occur in ~25–30% of cases with no family history
Spontaneous mutation in the APC gene
Loss of tumor suppressor function
APC gene normally regulates β-catenin and controls cell proliferation
Mutation disrupts this control, promoting polyp formation and progression to cancer
Attenuated FAP (AFAP)
Caused by specific mutations in different regions of the APC gene
Fewer polyps and later onset of colorectal cancer
MYH-associated polyposis (MAP) (FAP-like syndrome)
Caused by biallelic mutations in the MUTYH gene
Inherited in an autosomal recessive manner
Resembles attenuated FAP but is genetically distinct

Pathophysiology
FAP results from a germline mutation in the APC gene, a tumor suppressor gene located on chromosome 5q21–q22. The APC gene plays a crucial role in regulating the Wnt signaling pathway, particularly by controlling the degradation of β-catenin, a protein that promotes cell proliferation. When the APC gene is mutated, this regulation is lost, leading to the accumulation of β-catenin in the nucleus. This abnormal buildup triggers the activation of genes that drive uncontrolled cell division, resulting in the formation of numerous adenomatous polyps in the colon and rectum. Since individuals inherit one defective copy of the APC gene (first “hit”), a second somatic mutation (second “hit”) in the normal allele leads to complete loss of function, initiating polyp formation. Over time, some of these polyps acquire additional mutations (e.g., in KRAS, p53), leading to dysplasia and eventual malignant transformation into colorectal cancer. The pathophysiological process also affects other tissues, explaining the extracolonic manifestations such as duodenal polyps, desmoid tumors, and congenital retinal changes.
Symptoms
-Gastrointestinal Symptoms:
Rectal bleeding (most common early symptom)
Diarrhea or change in bowel habits
Abdominal pain or discomfort
Mucus in stool
Unexplained weight loss
Iron deficiency anemia (due to chronic blood loss)
-Colorectal Findings:
Development of hundreds to thousands of adenomatous polyps in the colon and rectum, usually in adolescence
Risk of progression to colorectal cancer by age 40–50 if untreated
-Extracolonic Manifestations:
Upper GI polyps (especially in the duodenum and stomach)
Desmoid tumors (fibrous tumors, often in the abdomen)
Osteomas (benign bony growths, often on skull or jaw)
Dental abnormalities (extra or unerupted teeth)
Congenital Hypertrophy of the Retinal Pigment Epithelium (CHRPE)
Epidermoid cysts and fibromas
Diagnosis
1. Clinical and Family History
Positive family history of FAP or early-onset colorectal cancer
First-degree relatives of affected individuals are at high risk
Consider FAP if a person develops >100 adenomatous polyps, especially before age 40
2. Endoscopic Examination
Colonoscopy (gold standard):
Reveals hundreds to thousands of adenomatous polyps throughout the colon and rectum
Typically begins around age 10–15 years in at-risk individuals
Upper GI endoscopy (EGD):
To detect duodenal or gastric polyps, especially in patients with known FAP
3. Genetic Testing
APC gene mutation analysis:
Confirms diagnosis
Identifies affected family members
Recommended for at-risk relatives
MUTYH gene testing (if APC negative and FAP features present):
For diagnosing MUTYH-associated polyposis (MAP)
4. Imaging (if needed)
CT/MRI of abdomen:
To assess for desmoid tumors or intra-abdominal complications
Ophthalmologic exam:
To detect CHRPE (congenital hypertrophy of the retinal pigment epithelium), a marker associated with FAP
5. Diagnosis is confirmed by:
Clinical criteria: ≥100 adenomatous polyps
Or genetic testing showing a pathogenic APC gene mutation
Treatment
1. Prophylactic Surgery (Mainstay of Treatment)
Recommended to prevent colorectal cancer, usually between late teens and early 20s or earlier if polyps are numerous or show dysplasia.
Colectomy with ileorectal anastomosis (IRA)
Removes colon, spares rectum
Requires lifelong rectal surveillance
Proctocolectomy with ileal pouch-anal anastomosis (IPAA)
Removes colon and rectum, creates a pouch from the small intestine
Preferred in cases with rectal involvement or high polyp burden
Total proctocolectomy with end ileostomy
For patients not suitable for pouch surgery (e.g., poor continence or advanced disease)
2. Endoscopic Surveillance
Annual colonoscopy or sigmoidoscopy starting at age 10–12 in at-risk individuals
Upper GI endoscopy (for duodenal and gastric polyps) starting around age 20 and repeated every 1–3 years depending on findings
3. Medical Therapy (Adjunct)
NSAIDs (e.g., sulindac, celecoxib):
May reduce the number and size of polyps
Not a substitute for surgery
Investigational agents: COX-2 inhibitors, EGFR inhibitors, etc.
4. Management of Extracolonic Manifestations
Desmoid tumors: Managed with NSAIDs, anti-estrogens, chemotherapy, or surgery if symptomatic
Gastric/duodenal polyps: Monitored and biopsied; surgery if high-grade dysplasia or obstruction
Thyroid and liver screening: Periodic ultrasound to detect tumors (e.g., papillary thyroid cancer, hepatoblastoma)
5. Genetic Counseling and Family Screening
First-degree relatives should undergo genetic testing
Positive individuals require lifelong surveillance and early intervention