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Clinical Cases

Crohn’s Disease

Clinical Subject Page

Also called

Terminal ileitis (If confined to terminal ileum)

ICD-10

K50.90

Specialty

Gastroenterology

Onset

Chronic

Reviewed

July 2026
On This Page

Overview of Crohn’s Disease

  • Crohn’s disease is caused by abnormal immune system activity, although the exact cause is unknown.
  • Some people may also develop problems outside the digestive system, such as inflammation of the eyes, joints, or skin.

Etiology & Risk Factors

-Etiology of Crohn’s Disease

  • The exact cause of Crohn’s disease is unknown.
  • It is believed to result from abnormal immune system activity and an imbalance of normal gut bacteria, leading to chronic inflammation.

-Risk Factors for Crohn’s Disease

  • Family history of Crohn’s disease
  • Genetic predisposition (e.g., certain inherited genes)
  • Smoking tobacco (the most important modifiable risk factor)

Pathophysiology of Crohn’s Disease

Immune dysregulation → Chronic intestinal inflammation → Edema + ulcers + tissue damage → Transmural (full-thickness) bowel inflammation → Fibrosis and scarring → Strictures/intestinal obstruction → Deep fissures → Abscess formation → Fistula formation

Clinical Presentation of Crohn’s Disease

  • Chronic diarrhea
  • Abdominal pain (usually in the right lower abdomen)
  • Weight loss
  • Fatigue
  • Low-grade fever
  • Loss of appetite
  • Malabsorption (may cause anemia and poor growth in children)
  • Perianal disease (fistulas, abscesses, or lesions)
  • Blood in stool (less common)
  • Extraintestinal manifestations:
  • Joint pain/arthritis
  • Eye inflammation (uveitis, episcleritis)
  • Skin lesions (erythema nodosum, pyoderma gangrenosum)
  • Mouth ulcers (oral aphthae)
Crohn's Disease Overview
Crohn's Disease Overview

History Taking

  • Ask about:

    • When did your symptoms start?
    • How often do you have diarrhea?
    • Do you have abdominal pain? Where is it located?
    • Have you noticed blood in your stool?
    • Have you lost weight recently?
    • Do you have fever or fatigue?
    • Have you lost your appetite?
    • Do you have nausea or vomiting?
    • Do you have pain or drainage around the anus?
    • Do you have mouth ulcers?
    • Do you have joint pain, eye redness, or skin rashes?
    • Do you smoke?
    • Does anyone in your family have Crohn’s disease or inflammatory bowel disease?
    • Have you had similar symptoms before?
    • What medications are you taking?

Physical Examination

  • Low-grade fever
  • Weight loss or signs of malnutrition
  • Right lower quadrant (RLQ) abdominal tenderness
  • Palpable abdominal mass (sometimes)
  • Perianal lesions (fissures, fistulas, abscesses, skin tags)
  • Signs of dehydration (if severe diarrhea)
  • Mouth ulcers (aphthous ulcers)
  • Joint swelling or tenderness
  • Eye redness/inflammation
  • Skin lesions (erythema nodosum, pyoderma gangrenosum)

Investigations of Crohn’s Disease

-Laboratory tests

  • CBC – anemia, infection
  • CRP and ESR – assess inflammation
  • Stool tests – rule out infection
  • Fecal calprotectin – detects intestinal inflammation

-Endoscopy

  • Ileocolonoscopy with biopsy – gold standard to confirm the diagnosis

-Imaging

  • MR enterography (preferred) – assesses small bowel involvement
  • CT abdomen – if complications (e.g., abscess, perforation) are suspected

-Biopsy findings

    • Transmural inflammation
    • Noncaseating granulomas (when present)

Diagnosis of Crohn’s Disease

  • Diagnosis is based on a combination of:
  • Clinical symptoms (chronic diarrhea, abdominal pain, weight loss)
  • Laboratory tests: ↑ CRP, ↑ fecal calprotectin
  • Ileocolonoscopy with biopsy (gold standard)
  • Endoscopic findings:
  • Skip lesions
  • Cobblestone appearance
  • Ulcerations
  • Imaging (MR enterography or CT): shows intestinal inflammation and extent of disease

Management of Crohn’s Disease

    • Refer to a gastroenterologist.
    • Smoking cessation.
    • Nutritional support and correct vitamin/iron deficiencies.
    • Acute flare:
      • Mild disease: Budesonide
      • Moderate to severe disease: Corticosteroids (e.g., prednisone)
      • Severe disease: IV corticosteroids and hospitalization if needed
    • Biologic therapy (e.g., anti-TNF agents such as infliximab or adalimumab) to induce and maintain remission.
    • Immunomodulators (e.g., azathioprine, methotrexate) for maintenance therapy.
    • Surgery for complications (e.g., bowel obstruction, fistulas, abscesses) or if medical treatment fails.
    • Regular follow-up to monitor disease activity and complications.

Complications of Crohn’s Disease

  • Strictures → bowel obstruction
  • Fistulas (especially perianal)
  • Abscess formation
  • Intestinal perforation → peritonitis
  • Malabsorption → weight loss, anemia, vitamin deficiencies
  • Colorectal cancer (increased risk)
  • Short bowel syndrome (after repeated surgery)
  • Primary sclerosing cholangitis (PSC)
  • Osteoporosis

Prognosis of Crohn’s Disease

  • Chronic disease with no cure.
  • Most patients have periods of relapse (flare-ups) and remission.
  • Early diagnosis and treatment help reduce complications.
  • Some patients eventually require surgery, but the disease can recur after surgery.
  • Poorly controlled disease increases the risk of strictures, fistulas, and the need for surgery.
  •  

Key Points / Clinical Pearls of Crohn’s Disease

  • Chronic inflammatory bowel disease (IBD) with no cure.
  • Can affect any part of the gastrointestinal tract, especially the terminal ileum.
  • Characterized by transmural (full-thickness) inflammation and skip lesions.
  • Common symptoms: chronic diarrhea, abdominal pain, and weight loss.
  • Smoking is the most important modifiable risk factor.
  • Ileocolonoscopy with biopsy is the gold standard for diagnosis.
  • Treatment aims to induce and maintain remission using medications such as corticosteroids, biologics, and immunomodulators.
  • Surgery may be needed for complications, but the disease often recurs after surgery.
  • Major complications: strictures, fistulas, abscesses, bowel obstruction, malabsorption, and increased risk of bowel cancer.
  • Regular follow-up, medication adherence, and smoking cessation are essential for long-term disease control.

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